Programming :: Get Job Submitted Through Sun Grid Engine?

Sep 14, 2010

I am a newb on linux and I really need some help on how to get my job submitted through sun grid engine. This is the script I need to submit

#!/bin/sh -f
FILE=$1
LGFL=`echo $FILE | sed 's/.$//' | sed 's/.$//'`
echo "Running -> " $FILE
echo "Octave Output -> " $LGFL".log"
nohup /home/guol2/octave-3.2.4/run-octave -q < $FILE >& $LGFL".log" &
echo "Command Started"

It basically stats Octave and run a file I typed after. So if I need to submit it through sun grid engine how would I type it in command line or how should I do it in the sun grid engine control panel. I tried qsub -o <my path> -e <my path> run_octave Myfile.m (Myfile.m is the file I need to run)

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Quote:
rpm -i sun-sge-bin-linux24-x64-6.2-5.x86_64.rpm
error: Failed dependencies:
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libXp.so.6()(64bit) is needed by sun-sge-bin-linux24-x64-6.2-5.x86_64
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I installed the latest version of openmotif and when I do a search for the two files, there is no libxm.so.3 but libxp.so.6 is there. When I try to install the rpm again I still get the exact same error.

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Mar 14, 2011

I am somewhat familiar with SGE (Sun Grid Engine, now Oracle Grid Engine) commands but am having a problem when running parallel jobs.

Present Machine configuration:
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machine II - 12 cpus
machine III - 12 cpus
.... so on ...
One_machine - 16 cpus

(I have all machine of 12 cpus and 1 machine having 16 cpus)

I want to schedule jobs on these machine such that if I ask for 12 cpus - my jobs should execute on any of the machines which has all 12 free cpus (eg machine I or machine II) in this case.

Eg. suppose I ask for 24 cpus

Option I : 12@machine1 12@machine2 ----- I need this

Options II : 10@machin1 10@machine2 4@machine3 ---- I don't need such a distribution

Hence, Option I is ideal here. Also, when running 12 jobs on machine1 (say) - even if all 12 cpus are not being used at some instance of time, none of the 12 cpus should be freed.
In short, until my run finishes, all blocked cpus should remain blocked.

If you may understand, the purpose here is to run some performance tests.

I'm using 'qrsh' to launch jobs.

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cd foo2zjs

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[root@arnab~]# make install
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$ ./getweb 1006
$ ./getweb 1007
$ ./getweb 1008
system-config-printer

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Code:
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Code:

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Code:

You should update your `aclocal.m4' by running aclocal.
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[code]....

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[Code]....

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