General :: Error Opening Matrix File (null) For Reading"
Dec 22, 2010
I have installed CUDA-BLASTP on C2050.It is giving me an Error:"Bad address Error opening matrix file (null) for reading" while i am running with following query file and dataset:
./CUDA-BLASTP -i ./data/raimondii_contigs.fasta -d ./data/DB_sorted.fasta
and i am using BLOSUM62 as a matrix file which is already present in package.
And getting the error:"Error happened when the number of GPUs is 0" while i am running CUDABLASTP with a part of dataset taking as a query file and dataset is same. above mentioned error is comming from file "CUDA_Blast.cu" included in package.
else
{
printf("Error happened when the number of GPUs is %d
", localGPU_N);
exit(0);
}
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Dec 8, 2010
I ran a program that writes continuously from 1 every line. After some time I ran '/dev/null > temp' Problem1: bash: /dev/null: Permission denied (Yes, the permissions of /dev/null are correct ... crw-rw-rw-. I removed and created it again, but no change) I used 'cat temp' to see the contents and first few lines deleted (working correctly). Problem2: I can't open the file (with double click or with any graphical editor like gedit)
Apart from these problems, I have another question... Is there a way to trim a active log file to say 80% without affecting any logs that server might be writing.
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Jan 12, 2011
I need to read a binary file using my C++ application. That binary file may contain arbitary characters and it also contains 0 at some places. I need to read the file without considering null terminating character. (i.e. considering 0 as a normal byte and not as the end of the string)Can some one suggest me a method to read the buffer while ignoring the null terminated character.
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Feb 24, 2011
I am trying to install a program and it spews out an error about the .obj/matrix.o file. The output is quoted here:
[code]...
The program I was trying to install is a robot simulator which performs lots of matrix manipulation and linear system solving. I followed every step in the installation guide, except for this one:
[code]...
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Aug 11, 2010
I use Codeblocks as IDE environment for my C programs. I recently added the matrix library Meschach, but unfortunately the headers are not found during compiling/linking process.For instance, my generic program is the one below:
Code:
#include <stdio.h>
#include <stdlib.h>
#include <matrix.h>
[code]...
This program generates the following error during compilation:
Quote:
main.c|3|error: matrix.h: No such file or directory|
And the declaration <matrix.h> is supposed to include the Meschach library, according to the instruction on the below link:
[URL]
Furthermore, I see on folder /usr/include the following:File stdio.h;
Filestdlib.h;
Folder "Meschach", which contains the file "matrix.h".
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Apr 21, 2010
I have the following working script. It checks the directory for txt files, if files are there, it copies to another directory or gives error. I would like to exclude "file not found" errors and send them to /dev/null. All other errors should go to the email address as usual.
Code:
#!/bin/bash
function err
{
if [[ $? -ne 0 ]]
[Code]....
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May 4, 2011
I don't understand the results of a simple performance test I ran using two basic scripts (running on a high end server):
perfVar.zsh :
#!/bin/zsh -f
MYVAR=`cat $1`
for i in {1..10}
[code]...
Performance test result:
> time ./perfVar.zsh BigTextFile > /dev/null
./perfVar.zsh FE > /dev/null 6.86s user 0.32s system 100% cpu 7.177 total
> time ./perfCat.zsh BigTextFile > /dev/null
./perfCat.zsh FE > /dev/null 0.01s user 0.10s system 91% cpu 0.118 total
I would have thought that accessing a VARIABLE was way faster than reading a FILE on the file system... Why this result ?Is there a way to optimize the perfCat.zsh script by reducing the number of accesses to the file system ?
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Nov 13, 2010
Recently I migrated from Ubuntu to Debian, first thing i wanted to do was to give myself sudo permissions and lock the roir account. By default sudo group don't have permissions to do this on debian, so i wanted to edit sudoers file by typing visudo. But i keep getting this
error: Error opening terminal: vanilla How can i solve this.
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Jun 29, 2010
I have a 7.2 GB file (VMWare virtual machine file) that I am trying to copy from its original location to the another folder OR to external hard drive...each time I try to do this, I always get the following error after the copying process reach 'exactly' 1.4 GB
Error reading from file input/output error
And I have to either Cancel or Skip
I've tried to split the files to smaller pieces but the idea didn't work as I still get the same error whenever I try to compress/ split or do any operation with this file. how I can copy this file?
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Feb 15, 2011
I know GEdit has a bug which prevents it from opening a file with null () characters in it. This is a huge inconvenience for me because I frequently have to open big log files with only a couple rogue 's in them.
Sometimes I just run a quick tr -d '' < file.log > file.log.correct and open the correct file. This is a big nuisance. I would like to have maybe an external tool in GEdit that would execute the above command. I tried writing an external tool action (GEdit plugin) using just:
#!/bin/bash
tr -d ''
Input is "current document", output action is "replace current document". But this isn't working. When I open the file, GEdit shows the familiar red warning; activating the external tool with the warning showing apparently has no effect (I think the script is being called but its input/output are not set).
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Feb 11, 2010
i have ubuntu karmic 9.10 and when i try to update anything or install anything the a very similar error occurs."(Reading database . . . 55%dpkg: unrecoverable fatal error , aborting: files list file for package `com.palm.net.precoddr.fcoaster' contains empty filenameit repeats this message 3 times then gives up i believe.
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Apr 13, 2011
I just can't find... why is my code seg-faulting?
PHP Code:
/*
Code name: Assignment #7.
File name: slice.c
Program name: Matrix multiplication (parallel version).
Version: 1.
[Code]...
Is giving my a seg-fault right at the ending point where I do the final gather from the MASTER processor.
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Aug 5, 2010
I have a server running Red Hat Enterprise Linux ES (2.6.9.55.ELsmp). When it starts up I get the following error: Uncompressing Linux... Ok, booting the kernel. Red Hat nash version 4.2.1.10 starting WARNING: can't access (null) exec of init ((null)) failed!!!: 14 unmount /initrd/dev failed: 2 Kernel panic - not syncing: Attempted to kill init!
After that I got no response from the OS. I have the installation CD, so I tried to start the rescue mode, while going through the steps I received an error stating that mounting to /mnt/sysimage failed and that if I want to I can access a shell. I really don't know what to do from here
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May 30, 2010
So the above is the error message I am receiving when trying to compile (at make stage when error received) binutils 2.20.1. I am compiling in Virtualbox and the base machine is SourceMage 64bit.
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May 20, 2010
i installed kernel 2.6.34 to fix my lid closing issue, and that went great. but now when i go to reinstall my broadcom i get this error. Code: Reading package lists... Done Building dependency tree Reading state information... Done bcmwl-kernel-source is already the newest version. 0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded. 1 not fully installed or removed. After this operation, 0B of additional disk space will be used. Setting up bcmwl-kernel-source (5.60.48.36+bdcom-0ubuntu3) ... Removing old bcmwl-5.60.48.36+bdcom DKMS files...
[Code].....
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Apr 4, 2011
I have been comileing that kinect hack with the 3d video capture. i did everything, calibrated cameras and everything else but when i try to open the final program (KinectViewer) i get back this error: Caught exception Misc::File: Error opening file CameraCalibrationMatrices-B00363201643043B.dat in mode rb. From what ive gathered off the web it is not opening it because its in binaly mode or something to that affect. any tips to fix it? is there a way to change what mode im in?
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Jan 6, 2010
I am trying to launch gst in frrescale IMX51 board. when i try to launch that i am getting the following error as [code]error in opeing firmware binary file pu bin file to /usr/lib folder or export VPU_FW_PATH env
ERROR: pipeline doesn't want to pause.setting pipeline to NULL FREEING pipeline ...[/code[
but i already exported the VPU_FW_PATH and its there in /usr/lib/ also. But still i am getting the same thing.
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May 1, 2010
Over the last few months there have been multiple updates and I am getting a list of things that no longer work or that cause my system to fail. I can no longer open a pdf in firefox. It says there is no application assigned to the task. I ran evince and tried to open a pdf file and received a "floating point" error message on the terminal screen I was working from.
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Sep 2, 2010
I have install samba server.Now i am trying to shift data from linux machine to windows machine.it gives following error. NT_STATUS_ACCESS_DENIED opening remote file history.txt firewall and iptables are also disabled.
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Jan 22, 2011
After boot, Fedora 14 gives the following message, on my HP Pavilion dv2701tx laptop.
Starting udev: udevd-work[454]: error opening ATTR{/sys/devices/pci0000:00/0000:00:1a.1/usb4/4-1/4-1:1.0/power/level} for writing: No such file or directory
I suspect it has something to do with my Authentec AES2501 fingerprint reader. I need it to work for my project, but it's not working, even though it works fine in the Windows 7 installed on my system.
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Feb 25, 2011
I am trying to install a program and it spews out an error about the .obj/matrix.o file.
The output is quoted here:
Code:
The program I was trying to install is a robot simulator which performs lots of matrix manipulation and linear system solving. I followed every step in the installation guide, except for this one:
On Ubuntu, all you need to do is install the following packages from the package manager:
libblas-dev
liblapack-dev
As shown above, I am using RHEL 6, which has different libraries with Ubuntu. I tried "yum search" and installed these libraries instead: lapack.x86_64 : Numerical linear algebra package libraries blas.x86_64 : The Basic Linear Algebra Subprograms library.
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Apr 26, 2010
I am having a laptop with Vista installed on it. I have an Ubuntu live CD (karmic) which is refusing to boot on this machine. I get an error : "Error reading boot CD" and a reboot button. I have tried this cd on other machines and it works fine. I tried live CD of kubuntu also but the same error message appears. What could be the reason?
Machine spec: 2GB RAM, Intel core 2 duo processor.
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Jun 8, 2011
is there any API to read content of PDF file & store it in buffer?
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Nov 17, 2010
been playing around making a server to play some games on running centos 5.5
what ive spent a while looking for (a few days) is a way to make a file which i will call startup this will contain some values
Code:
mod_directory="etpub"
port="27960"
log_name="console.log"
vm="0"
dedicated="2"
[Code].....
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Jul 18, 2010
I'm running Sendmail with SASL Authentication and STARTTLS and this error always turns up in my log, even though the server works as a charm apart from that.
Code:
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Feb 18, 2010
I wish to know what could be the possible cases for this error:cp: reading `filename': Input/output errorI am getting this message when I am trying to copy a big file of around 50MB.
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Aug 12, 2010
I am trying to configure rsh on..but it comes up with a error message error reading information on service -rsh...
when i query rpm -q rsh..It displays rsh package..
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Mar 2, 2010
I am installing Nagios Monitoring tool in RHEL5 and I got stuck at one point. The details are as follows:
Nagios version:3.0.1
At the end of installation when I try to execute the command
#chkconfig --add nagios
Its displaying "error reading information on service nagios : no such file or directory".
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Apr 20, 2010
I have a .bkf backup file, created by the Backup utility that Microsoft provides with Windows XP. Is there a way to read the contents of the file using a non-Microsoft OS, preferably Mac OS X or Linux?
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Dec 2, 2010
I have a file named file.txt with the following contents
Code:
19 man
24 house
44 dyam
90 random
I want to read the file into array and store each line in each index. I've tried using the following code.
Code:
dataarray=($( < file.txt ))
It stores each word in each index rather than each line in each index.
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