Programming :: Awk Character Position Matching?
Apr 22, 2011
I am trying to check if the 9th character in a file on each line is a v and if so, then print the first word. I've tried a number of variations and am stuck !If it's possible to also check if character position 1 begins with a s in the same awk, that would make it cleaner instead of using egrep.
egrep '^s' file | nawk '{virtual=substr($0,9,1); if ($virtual=="v") {printf "%s", $1}}'
nawk: illegal field $(e)
input record number 1
source line number 1
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Apr 7, 2011
I have the following string:"My dog spot(page 1)". I want just "My dog spot". How do I do this in SQL Server?
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Oct 3, 2010
I have a set of files containing DNA or amino acid sequences from various organisms:
Code:
>14432|LGIG|186221
--MISVLAMA-NRITAAEKR
>14432|CAP1|21057
MVRVNVLADALKSI-TAEKR
>14432|HROB|156827
--RMNVLADALXSIC?AEKR
>14432|NVEC|159589
-VRVNVLN-ALNSICNAEX-
[Code]...
Can anyone help me get the position of the first and last non-missing data characters (while allowing missing data characters in the middle of the sequence)? I'm sure it is a simple sed or awk command but I can't figure it out. I think I can produce the output file I want once I have figured those commands out.
My ultimate goal is to write a script that can make composite sequences from two or more non-overlapping sequences (e.g., the two sequences from NEOM). I may also want to merge sequences that partially overlap (e.g., those from TEST) but that would complicate things. Is this a logical first step for such a script or would you do it differently?
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Jan 20, 2009
I'm having a small issue with regex matching in Perl. I'm pretty certain it's a simple fix, but it all looks correct to me...
If I run the following:
Code:
It prints out all the lines containing a 'P', as one would expect. But when the regex is
Code:
I get zero lines printed. It seems to match only single-character patterns.
The file I'm reading is: (It has the same effect whether I leave it with Windows linebreaks or convert them to unix).
Code:
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Mar 2, 2011
I have two table files with x (1st column) ,y (2nd column) coordinates and intensity (3rd column). I need to match these two tables and divide the intensities at the consecutive coordinates on the 3rd column. The problem is the size of the tables are not same and I want to ignore the lines if they are not in one of the other file.
Here is Table 1:
Code:
-7.500-30.00013.006
-7.500-22.50037.952
-7.500-15.00060.962
-7.500-7.50040.922
-7.5000.00014.348
code....
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Mar 27, 2010
1.What character instructd the shell to interpret a special character as an ordinary character?
2.What directory contains some of the utilities available on the system in the form of binary files?
3. What command is used to search the location of a utility?
4. What command is used to instruct the editor to write the file and quit the editor?
5. What key quits the more utility and displays the shell prompt?
6. What command starts a child shell as the super user, taking on root's identity and environment?
7. Which wildcard characters can be used for searching all the files in the system that start with "A"?
8. The user name or login name of the super user is????
[Code]....
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Jan 13, 2011
In a bash-script, only the case if a regular expression does not match is relevant.herefore I used the exclamation mark !. But where to place it?
These two work fine, but are they equivalent?
Code: if ! [[ $abc =~ $pattern ]]; then or
Code: if [[ ! $abc =~ $pattern ]]; then Where is the ! placed more correct?
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Feb 3, 2011
I need to add some text using sed before and after the matching pattern. Does any one have any clue?e.g.cat /my/file | sed -e "s/first pattern/New Pattern/g" . /my/file.bakNow I need a result like New Pattern
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May 11, 2011
I am struggling to understand why nawk matches values that are either 1 or 2 digits in length, but not 100 (3 digits).
Am I missing something obvious ? Should I use substr to remove the % ?
I am sure it's something to do with character and string matching behaviour with nawk.
Code:
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Dec 13, 2010
i need to overwrite each line of the file starting from a specific position to the end of the line
example:
ATOM 981 N PRO B 159 55.662 7 1 1.47 0.75
i need to write " 1.00 0.00 " starting from 20position
i tried
sed -i 's/^(.{20})*/ 1.00 0.00 ' filename
but it doesnt work :"(
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Feb 18, 2011
If I have a MySQL field called, say, "Occupation", which contains "Java Programmer" in it, I would like it to come up when I search for "Java", so that I can get to the other fields in the table.
How do I do this?
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Aug 7, 2010
i tried searching on google but found it difficult to say exactly what I was looking for.Task - Capitalise x number of letters at the start of words.eg. Original line - one.two.three.fourRevised line - One.Two.three.four (here only requiring 2 changes)Test data:
Code:
wire.in.the.blood.s04e01.ws.pdtv.xvid-river.avi
wire.in.the.blood.s04e02.ws.pdtv.xvid-river.avi
[code]...
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Mar 19, 2010
I'm trying to find out how to extract the string between the 2 <title> tags: <title>this is what i want</title>.I found lots of results but nothing I've tried works.. EG:$page =~ m/<title>($.)</title>/gism;
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Aug 18, 2009
I have a file which has the words "splashimage and "splash". I would like to remove the word only "splash" from everywhere.
Using the following command code...
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Jul 12, 2009
Is there a way, preferably in python or BASH, to rename files from a list? for instance, track1.mp3, track2.mp3 should be renamed to the names stored in a file listing song names. I have tried to loop a variable through directory listing and renamed them, only to find that filenames with spaces can't be assigned to a variable as a whole. To solve the problem above, I have tried the read command in BASH, which enables the program reading line by line from a list. However, It was failed to pipe the results from directory listing to the read command.
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Mar 27, 2011
I have a question about sed programming, actually a one-liner for which I cannot find a solution, right now. I need to delete a line matching a specific pattern only if it is the last line. In practice, I would put together the following:
Code:
#
# This deletes the last line of a file
[code]...
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May 26, 2011
I've been hitting my head against a wall for awhile with this one:As the last part of some data analysis I performing I would to construct a matrix from a series of different files. These files have the format:
file 1 file 2 file 3
AAAAA .1 AAAAA .1 BBBBB .1
BBBBB .2 BBBBB .1 CCCCC .9
[code]...
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Jan 26, 2010
Quote:Originally Posted by topcatI would like to know how i can write a shell script to delete a line if a particular pattern exists?E.g. I have a text file with multiple lines. Say 1000s. in the following pattern.
username@email.com:149.0.3.4:1
username1@email.com:149.0.3.4:1
username1@email.net:149.0.3.4:1
username1@email.edu:149.0.3.4:1
If the patternusername@email.com exists then the line "username@email.com:149.0.3.4:1 should be deleted from the file.I have a very similar question but I need to delete one line in a file which matches one very precise instance of a string only. Let's assume I have a file composed of thousands of lines and let's call the file chap-secrets. Let's take the following sample entries:
Code:
#USERNAME SERVER PASSWORD IP
pp pptpd blahblah *
[code]....
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Apr 8, 2010
bash script:
Code:
$ bash --version
bash --version
GNU bash, version 3.1.17(2)-release (i486-slackware-linux-gnu)
Copyright (C) 2005 Free Software Foundation, Inc.
Code:
[serv:]$ cat test.sh
#!/bin/bash
[Code]...
The question is, how to config it works through 'function cool {}' or cool() {} with position parameter
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Oct 19, 2010
I have this complex log file filled with entries like
test1-G1/0/0-100-QOS-7001923-ROUTING (ClassMap)
Action: Resolved New
sysName: test1.local
[code]...
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Aug 16, 2010
I have written a regular expression (tested in regexpal and regextester alpha something) with which I want to replace something like code...
but it only matches functions which occupy one line only, despite my tests showing multiple line matching in javascript testers online and using the m and s flags (which should make it multi line no?)
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Jan 14, 2010
I want pass a variable at compile time.
for example in x.c
int global_var = POSITION;
How can I send this POSITION at compile time. ie like # make POSITION=10 Is it possible?
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Sep 3, 2010
I am interested in the following problem: given a string (pattern) find a regexp which match this pattern.
I will need this for a developing of an idea 'pattern based filtration'.
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Jul 28, 2010
I have two files :
FileA
prot1
prot5
prot9
prot15
[Code]....
What I need to do is to extract from fileB the fields containing only the strings in fileA.
I thought awk could do the job easily with :
Code:
awk 'BEGIN { RS = "###" } /'$variable'/' fileB > output
where variable would maybe be the output of grep from fileA. So can I store the output of grep in a variable to use it afterwards with awk ?
something like that:
Code:
result=`grep prot. fileA` ; awk 'BEGIN { RS = "###" } /'$result'/' fileB > output
but that doesn't work. I'm always getting the entire fileB.
The output of grep get stored in the variable, I verified that with echo. So there is something that I just don't get... It seems to me that the above line should work.
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Jun 27, 2010
I have a string like this "/home/test/filename.txt" and i want to delete all character after the last "/". how to do that using sed or awk.
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Nov 3, 2010
I was reading Kernighan Ritchie book chapter 4 which deals with character pointers.I am not able to understand following different type of declarations
Code:
char aname[][15] = { "Illegal month", "Jan", "Feb", "Mar" };
char amessage[] = "now is the time";
[code]...
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Oct 23, 2010
i am compiling the following program in linux. it's in c language. after the compilation with gcc when i run the executable file. it asks for input. but when i enter a name. i prints "Segmentation fault" and then terminate the program. can you please help me.
#include <stdio.h>
#include <ctype.h>
#include <stdlib.h>
#include <unistd.h>
[code]....
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Feb 24, 2010
which is the simplest way to have first and last character cropped out from a string? Something simpler than
Code:
echo $STRING | cut -b 2- | rev | cut -b 2- | rev
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Mar 30, 2010
I have the following file:
Code:
1 line
...
49 test test=AA:AA:AA:AA:AA=0
I need to substitute on the line number 49, all text until =. I have used the following, but with no actual result.
sed -re '49s/^.+=//' file
and
sed -e '49s/.*[=]//' file
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May 11, 2011
I have a file with one line. I want to check whether the first character is TAB or space, how can i do this.? using "cut" wont as it "bypasses the tab and space characters"
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