Server :: Running Apache 2.2.3 - High Swap Usage

Oct 2, 2009

I am running Apache 2.2.3 on a CentOS release 5.3 (Final) with 100 Sites. I've notice that Apache is making my server Swap around 200 MBs.
"http://www.xxx.yyy.zzz/server-status" doesn't show me too much to, so I am looking the behavior of specific httpd process.
ProcessID "18753" is the one for "http://www.xxx.yyy.zzz/server-status" in my browser.

This command show me (In KBs) how much virtual memory is that specific process using:
# /etc/init.d/httpd start
# grep Private_Dirty /proc/18753/smaps | awk '{ print $2 }' | xargs ruby -e 'puts ARGV.inject { |i, j| i.to_i + j.to_i }'
3012
... Running this command a lot of times it gives me the same output, but suddenly...
# grep Private_Dirty /proc/18753/smaps | awk '{ print $2 }' | xargs ruby -e 'puts ARGV.inject { |i, j| i.to_i + j.to_i }'
21708

Something make that process (and all the others httpd process too) to use a lot more memory!

Part of my httpd.conf:
# Timeout 120
KeepAlive On
MaxKeepAliveRequests 100
KeepAliveTimeout 3

<IfModule prefork.c>
StartServers 5
MinSpareServers 5
MaxSpareServers 20
ServerLimit 256
MaxClients 256
MaxRequestsPerChild 100
</IfModule>

<IfModule worker.c>
StartServers 2
MaxClients 150
MinSpareThreads 25
MaxSpareThreads 75
ThreadsPerChild 25
MaxRequestsPerChild 0
</IfModule> #

My server is running Mysql 5.1.34, vsftpd 2.0.5, BIND 9.3.4-P1 (as slave). I couldn't found anything running in the specific time that httpd processes start to use that much memory.

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i am learning to using ubuntu as my server and learning using vps too

now i getting consfuse about my server memory usage i just have 3 sites , 1 blog site and 2 company profile but apache memory usage is more than 300MB and total of memory use in my server is more than 500 MB (maximum 512MB burst memory)

i am using drupal for my website is this normal ? because in last week, memory consumption in my server no more than 380 MB

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Attached are two pictures ,
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Pasting d my.cnf file-
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Just noticed from the "top" command that one of my least heavily used box is swapping excessivly by a program called setroubleshootd. Following is the top section of the "top" command sorted by Swap used for both boxes. Also tried checking it out to see if there's a "service setroubleshootd restart" but when I checked the status I got the following.

Code:
[root]# service setroubleshootd status
setroubleshootd: unrecognized service
Lightly loaded box with lots of swapping

Code:
Tasks: 85 total, 2 running, 83 sleeping, 0 stopped, 0 zombie
Cpu(s): 0.0%us, 0.0%sy, 0.0%ni, 98.0%id, 1.7%wa, 0.0%hi, 0.3%si, 0.0%st
Mem: 1026880k total, 983528k used, 43352k free, 59604k buffers
Swap: 2064376k total, 355692k used, 1708684k free, 121996k cached

PID USER PR NI VIRT RES SHR S %CPU %MEM TIME+ SWAP COMMAND
3319 root 15 0 1202m 665m 5748 S 0.0 66.3 23:29.99 537m setroubleshootd
3845 root 34 19 253m 14m 2188 S 0.0 1.5 0:34.41 238m yum-updatesd
3841 gdm 16 0 216m 5300 4236 S 0.0 0.5 0:00.15 211m gdmgreeter
3822 root 18 0 190m 2208 1568 S 0.0 0.2 0:00.00 187m gdm-binary
3824 root 15 0 185m 3948 3236 S 0.0 0.4 0:00.11 181m gdm-rh-security
3725 root 16 0 163m 2532 1920 S 0.0 0.2 0:00.00 161m gdm-binary
3500 root 18 0 130m 2140 1240 S 0.0 0.2 0:00.00 128m cupsd
Heavily used box with little swapping

Code:
Tasks: 118 total, 4 running, 113 sleeping, 0 stopped, 1 zombie
Cpu(s): 4.7%us, 0.3%sy, 0.0%ni, 94.7%id, 0.0%wa, 0.0%hi, 0.3%si, 0.0%st
Mem: 2059580k total, 1928356k used, 131224k free, 162032k buffers
Swap: 4095992k total, 12k used, 4095980k free, 1336632k cached

PID USER PR NI VIRT RES SHR S %CPU %MEM TIME+ SWAP COMMAND
3842 root 34 19 253m 17m 2196 S 0.0 0.9 0:34.20 235m yum-updatesd
3284 root 15 0 301m 77m 6004 S 0.0 3.9 2:23.30 223m setroubleshootd
3840 gdm 16 0 216m 16m 7064 S 0.0 0.8 0:00.43 199m gdmgreeter
3814 root 18 0 190m 2352 1644 S 0.0 0.1 0:00.00 187m gdm-binary
3816 root 15 0 185m 4112 3384 S 0.0 0.2 0:02.90 181m gdm-rh-security
3724 root 15 0 163m 2588 1976 S 0.0 0.1 0:00.00 161m gdm-binary
3465 root 18 0 141m 14m 1824 S 0.0 0.7 0:00.06 127m cupsd
12799 daemon 18 0 103m 3708 648 S 0.0 0.2 0:00.00 100m httpd
12396 daemon 15 0 112m 13m 3440 S 0.0 0.7 0:00.99 98m httpd
3556 root 18 0 103m 5260 2208 S 0.0 0.3 0:37.68 98m httpd
11778 daemon 15 0 117m 19m 3144 S 2.3 1.0 0:01.76 98m httpd
12750 daemon 15 0 106m 9096 2860 S 0.0 0.4 0:00.04 97m httpd
12673 daemon 15 0 110m 12m 2876 S 0.0 0.6 0:00.23 97m httpd
12693 daemon 15 0 110m 13m 2876 S 0.0 0.7 0:00.18 97m httpd
12666 daemon 15 0 105m 8132 2888 S 0.0 0.4 0:00.19 97m httpd
12729 daemon 15 0 112m 15m 2968 S 0.0 0.8 0:00.11 97m httpd
12588 daemon 15 0 110m 12m 2984 S 0.0 0.6 0:00.54 97m httpd

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#ps -eo vsz,rss,pid,args | sort -n

How to accurately calculate which process consuming from swap, just the swap no ram + swap!

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Nagios had alerted me that the server had a very high load average exceeding the critical level (17+), when logging onto the server I found that all 4GB of the swap was in use despite the fact that there was 15GB+ of free memory (and that's not even including memory from cache and buffers!) Because it seems all heavily used pages were being stored in swap, the I/O wait on the server became very high, and 4 kswapd daemons were taking up nearly 100% available CPU. This did coincide with an error reported by Bacula during a backup job while changing to a bad tape...

From /var/log/bacula.log:
Code:
10-Dec 02:11 bacula-sd JobId 1898: End of medium on Volume "4097" Bytes=434,170,000,000 Blocks=217,084 at 10-Dec-2010 02:11.
10-Dec 02:11 bacula-sd JobId 1898: 3307 Issuing autochanger "unload slot 4097, drive 0" command.
10-Dec 02:12 bacula-sd JobId 1898: 3301 Issuing autochanger "loaded? drive 0" command.
10-Dec 02:12 bacula-sd JobId 1898: 3302 Autochanger "loaded? drive 0", result: nothing loaded.
10-Dec 02:12 bacula-sd JobId 1898: 3304 Issuing autochanger "load slot 4096, drive 0" command.
10-Dec 02:13 bacula-sd JobId 1898: 3305 Autochanger "load slot 4096, drive 0", status is OK.
10-Dec 02:13 bacula-sd JobId 1898: Volume "4096" previously written, moving to end of data.
10-Dec 03:51 bacula-sd JobId 1898: Error: Unable to position to end of data on device "Tape-1" (/dev/IBMtape0n): ERR=dev.c:1384 read e
rror on "Tape-1" (/dev/IBMtape0n). ERR=Input/output error.

10-Dec 03:51 bacula-sd JobId 1898: Marking Volume "4096" in Error in Catalog.
10-Dec 03:51 bacula-sd JobId 1898: 3307 Issuing autochanger "unload slot 4096, drive 0" command.
10-Dec 03:58 bacula-sd JobId 1898: 3301 Issuing autochanger "loaded? drive 0" command.
10-Dec 03:58 bacula-sd JobId 1898: 3302 Autochanger "loaded? drive 0", result: nothing loaded.
10-Dec 03:58 bacula-sd JobId 1898: 3304 Issuing autochanger "load slot 4098, drive 0" command.
10-Dec 03:58 bacula-sd JobId 1898: 3305 Autochanger "load slot 4098, drive 0", status is OK.
10-Dec 03:59 bacula-sd JobId 1898: Wrote label to prelabeled Volume "4098" on device "Tape-1" (/dev/IBMtape0n)
10-Dec 03:59 bacula-sd JobId 1898: New volume "4098" mounted on device "Tape-1" (/dev/IBMtape0n) at 10-Dec-2010 03:59.
At the same time, these messages starting occuring in /var/log/messages:

Code:
Dec 10 03:51:47 07 kernel: Mem-info:
Dec 10 03:51:47 07 kernel: Node 0 DMA per-cpu:
Dec 10 03:51:47 07 kernel: cpu 0 hot: high 0, batch 1 used:0
Dec 10 03:51:47 07 kernel: cpu 0 cold: high 0, batch 1 used:0
Dec 10 03:51:47 07 kernel: cpu 1 hot: high 0, batch 1 used:0
Dec 10 03:51:47 07 kernel: cpu 1 cold: high 0, batch 1 used:0
Dec 10 03:51:47 07 kernel: cpu 2 hot: high 0, batch 1 used:0
Dec 10 03:51:47 07 kernel: cpu 2 cold: high 0, batch 1 used:0
Dec 10 03:51:47 07 kernel: cpu 3 hot: high 0, batch 1 used:0
Dec 10 03:51:47 07 kernel: cpu 3 cold: high 0, batch 1 used:0
Dec 10 03:51:47 07 kernel: cpu 4 hot: high 0, batch 1 used:0
Dec 10 03:51:47 07 kernel: cpu 4 cold: high 0, batch 1 used:0
Dec 10 03:51:47 07 kernel: cpu 5 hot: high 0, batch 1 used:0
Dec 10 03:51:47 07 kernel: cpu 5 cold: high 0, batch 1 used:0
Dec 10 03:51:47 07 kernel: cpu 6 hot: high 0, batch 1 used:0
Dec 10 03:51:47 07 kernel: cpu 6 cold: high 0, batch 1 used:0
Dec 10 03:51:47 07 kernel: cpu 7 hot: high 0, batch 1 used:0
Dec 10 03:51:47 07 kernel: cpu 7 cold: high 0, batch 1 used:0
Dec 10 03:51:47 07 kernel: Node 0 DMA32 per-cpu:
Dec 10 03:51:47 07 kernel: cpu 0 hot: high 186, batch 31 used:162
Dec 10 03:51:47 07 kernel: cpu 0 cold: high 62, batch 15 used:48
Dec 10 03:51:47 07 kernel: cpu 1 hot: high 186, batch 31 used:0
Dec 10 03:51:47 07 kernel: cpu 1 cold: high 62, batch 15 used:0
Dec 10 03:51:47 07 kernel: cpu 2 hot: high 186, batch 31 used:0
Dec 10 03:51:47 07 kernel: cpu 2 cold: high 62, batch 15 used:0
Dec 10 03:51:47 07 kernel: cpu 3 hot: high 186, batch 31 used:18
Dec 10 03:51:47 07 kernel: cpu 3 cold: high 62, batch 15 used:0
Dec 10 03:51:47 07 kernel: cpu 4 hot: high 186, batch 31 used:159
Dec 10 03:51:47 07 kernel: cpu 4 cold: high 62, batch 15 used:56
...
Dec 10 03:51:47 07 kernel: Node 3 HighMem per-cpu: empty
Dec 10 03:51:47 07 kernel: Free pages: 732052kB (0kB HighMem)
Dec 10 03:51:47 07 kernel: Active:4232128 inactive:3071288 dirty:158210 writeback:0 unstable:0 free:183320 slab:256840 mapped-file:289545 mapped-anon:3805487 pagetables:13063
Dec 10 03:51:47 07 kernel: Node 0 DMA free:10796kB min:4kB low:4kB high:4kB active:0kB inactive:0kB present:10356kB pages_scanned:0 all_unreclaimable? yes
Dec 10 03:51:47 07 kernel: lowmem_reserve[]: 0 3512 9067 9067
Dec 10 03:51:47 07 kernel: Node 0 DMA32 free:213332kB min:2500kB low:3124kB high:3748kB active:1794108kB inactive:1463220kB present:3596296kB pages_scanned:64 all_unreclaimable? no
Dec 10 03:51:47 07 kernel: lowmem_reserve[]: 0 0 5555 5555
Dec 10 03:51:47 07 kernel: Node 0 Normal free:41028kB min:3952kB low:4940kB high:5928kB active:3409444kB inactive:1471120kB present:5688320kB pages_scanned:0 all_unreclaimable? no
Dec 10 03:51:47 07 kernel: lowmem_reserve[]: 0 0 0 0
Dec 10 03:51:47 07 kernel: Node 0 HighMem free:0kB min:128kB low:128kB high:128kB active:0kB inactive:0kB present:0kB pages_scanned:0 all_unreclaimable? no
Dec 10 03:51:47 07 kernel: lowmem_reserve[]: 0 0 0 0
Dec 10 03:51:47 07 kernel: Node 1 DMA free:0kB min:0kB low:0kB high:0kB active:0kB inactive:0kB present:0kB pages_scanned:0 all_unreclaimable? no
...
Well to cut a long story short, I fixed the problem by disabling the swap partition with 'swapoff'. After about 30 mins all the swap was freed and the server went back to normal. I don't dare reactivate the swap partition and unfortunately as this is a live server which currently has no fail over, I can't reboot either

Server Spec:
4 * Dual-Core AMD Opteron(tm) Processor 8214
32GB DDR2 ECC RAM
RHEL 5.5, 2.6.18-194.11.3.el5 SMP x86_64
Running many KVM VMs (All CentOS x64) and kksmd is used.
bacula-dir Version: 5.0.0
IBM Tape Drive using lin_tape module version 1.34.0 according to modinfo

And before anybody asks
# sysctl vm.swappiness
vm.swappiness = 10

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Code:
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[Code].....

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[Code]....

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[code]....

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