Fedora :: Rpmdb: PANIC: Fatal Region Error Detected; Run Recovery
Nov 12, 2009
I am getting an error from yum update and Kpackagekit:
[root@asus-m4n82 tylerm]# yum update
Loaded plugins: refresh-packagekit
Setting up Update Process
rpmdb: page 18816: illegal page type or format
[code]....
How do I "run recovery"? Edit: Ok so it looks like I had som bad ram in my system that caused this - I found a site that told me to do this:
rm -f /var/lib/rpm/__db*
rpm rebuilddb
yum clean all
I did this but now when I try something like yum install firefox it pulls in a ton of already installed packages.
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Nov 13, 2010
for some reason my first updating was interrupted and from then i cannot update. i get the following message:
rpmdb: PANIC: fatal region error detected; run recovery
error: db3 error(-30974) from dbenv->open: DB_RUNRECOVERY: Fatal error, run database recovery
error: cannot open Packages index using db3 - (-30974)
error: cannot open Packages database in /var/lib/rpm
CRITICAL:yum.main:
Error: rpmdb open failed
[root@laptop etc]# yum repolist
[Code]....
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Mar 2, 2010
When I deleted uninstalling and installing some packages in Yast2 I got this output:
Deleting mc
Additional rpm output:
rpmdb: PANIC: Invalid argument
rpmdb: PANIC: fatal region error detected; run recovery
error: db4 error(-30977) from dbcursor->c_put: DB_RUNRECOVERY: Fatal error, run database recovery
error: error(-30977) storing record "4.0-1" into Requireversion
rpmdb: PANIC: fatal region error detected; run recovery
error: db4 error(-30977) from dbcursor->c_get: DB_RUNRECOVERY: Fatal error, run database recovery
error: error(-30977) setting "3.0.4-1" records from Requireversion index
rpmdb: PANIC: fatal region error detected; run recovery
error: db4 error(-30977) from dbcursor->c_get: DB_RUNRECOVERY: Fatal error, run database recovery
error: error(-30977) setting "" records from Requireversion index
and on and on for 3 pages for every package.
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Apr 9, 2010
Today i upgraded my system and started getting error when i update, install or remove a package. The error isn't restricted only to one repository so i thing something is wrong with my system.
[Code]....
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Apr 13, 2011
I'm tring to run AMDOverdriveCtrl, since they don't have an RPM file for Fedora i tried to compile from source i followed the instruction in the readme files run the make command
Code:
% make
g++ -mwindows -s -pthread -lwx_gtk2u_richtext-2.8 -lwx_gtk2u_aui-2.8 -lwx_gtk2u_xrc-2.8 -lwx_gtk2u_qa-2.8 -lwx_gtk2u_html-2.8 -lwx_gtk2u_adv-2.8 -lwx_gtk2u_core-2.8 -lwx_baseu_xml-2.8 -lwx_baseu_net-2.8 -lwx_baseu-2.8 -ldl -o./Release/AMDOverdriveCtrl ./src/CFanSpeedPanel.o ./src/COvdrSettingsPanel.o ./src/CFanControlPanel.o ./src/CColorTempPanel.o ./src/BezierMath.o ./src/Color.o
[code]....
and tried to run the application, and i get this error message
Code:
$ AMDOverdriveCtrl
Fatal Error: Mismatch between the program and library build versions detected.
The library used 2.8 (no debug,Unicode,compiler with C++ ABI 1002,wx containers,compatible with 2.4,compatible with 2.6), and your program used 2.8 (no debug,Unicode,compiler with C++ ABI 1002,wx containers,compatible with 2.6).
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Jun 28, 2010
Code:
(with --nodeps --force) Error: Subprocess failed. Error: RPM failed: rpmdb: PANIC: Invalid argument
rpmdb: PANIC: fatal region error detected; run recovery
[code]...
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Apr 12, 2010
I migrated to Debian sid, but since then I got this error everytime I launch Update Manager (whether it's in graphical mode or from a shell). Just after putting down my root password, I got this error:
Title of the window: (as superuser) A fatal error has been detected in update-manager. Do you want to submit a bug report? Selecting No will close the application. Whether I click Yes or No, nothing happens.
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Apr 8, 2011
Some files are generating in my Documents folder named hs_err_pid4214.log ........ different logs files are generated. I put the contents of one of them:
Code:
A fatal error has been detected by the Java Runtime Environment:
SIGSEGV (0xb) at pc=0x00007f1714b33e30, pid=4214, tid=139736470193920
JRE version: 6.0_24-b07
Java VM: Java HotSpot(TM) 64-Bit Server VM (19.1-b02 mixed mode linux-amd64 compressed oops)
Problematic frame:
C [libsvllx.so+0x82e30] _ZN26SvNumberFormatsSupplierObj18SetNumberFormatterEP17SvNumberFormatter+0x0
# If you would like to submit a bug report, please visit: [URL]. The crash happened outside the Java Virtual Machine in native code. See problematic frame for where to report the bug.
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Mar 7, 2011
A fatal error has been detected by the Java Runtime Environment?
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Feb 20, 2010
I'm a recently proud owner of a new Aspire AS3810T with Fedora 12 installed, when it boots up before entering the boot screen when it loads I see this error message:IOMMU: Mapping reserved region failedHow can i fix this error? It's quite frustrating
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Apr 2, 2009
After update to 5.3 and reboot I got this error. googling for it I found that it is a known bug in kernel REHL 5.3 and there is also a patch for it [URL]. I am very new to linux, so how to apply, or just wait for a new kernel?
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Aug 4, 2010
I have a situation where there are no logs in /var/log/messages and this has happened the second time during two weeks.
Snapshot of the screen was taken when this happened and the server was restarted. Since it's a time sensitive matter.
Snapshot:[url]
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Feb 18, 2010
I have a 8.04 x64 server installation that is receiving a kernel panic on boot no matter which kernel I choose even recovery mode.
[ 27.738620] raid1: raid set md0 active with 1 out of 2 mirrors
Done.
Begin: Running /scripts/local-premount ...
kinit: name_to_dev_t(/dev/disk/by-uuid/c224854e-37bd-491a-b895-48e8bf07fe00) = md1(9,1)
kinit: trying to resume from /dev/disk/bby-uuid/c224854e-37bd-491a-b895-48e8bf07fe00
[ 31.665733] Attempting maual resume
kinit: No resume image, doing normal boot...
Done.
[ 31.717461] kjournald starting. Commit interval 5 seconds
[ 31.717471] EXT3-fs: mounted filesystem with ordered data mode.
Begin: Running /scripts/local-bottom ...
Done.
Done.
Begin: Running /scripts/init-bottom ...
Done.
init: Error parsing configuration: No such file or directory
[ 32.064009] Kernel panic - not syncing: Attempted to kill init!
I have built a new server, now I am trying to restore my db from mysql. I have a backup that is out dated, I was hoping there was a way to copy the files over and have them work on the new installation. I can boot the server with the installation cd using recovery mode, I can get to the hdd and mount a smbfs share from the new server. I have tried to cp the files retaining the permissions and get a permission denied error, but if I copy without retaining the perms they copy just fine and do not work.
I have setup the new server with very close to the same version of all software. I have built a new instance of my service using all of the same users and passwords. I then backed up the new db and moved it over and attempted to copy the old db over. I did not copy it straight to the mysql folder as I did not share that folder out. Any other ideas to get this db recovered? What about getting my old server to run again just long enough to get a mysql dump?
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Dec 8, 2009
Last night software updater notification showed 29 updates. I was building a liveCD image so decided create the image first then install the updates. After the updates were finished, I did a reboot because some packages required it, I logged on successfully, then I shutdown for the night. This morning when I executed the same command used to create the liveCD image, I get the following error.
[Code]....
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Jun 25, 2009
I updated the latest kernel and other new maintenance tonight and started getting this error at boot...doesn't appear to be hindering anything. My encrypted partitions (luks, ext4) still open and are accessible.
modprobe: FATAL: Error inserting padlock_sha (/lib/modules/2.6.29.5-191.fc11.i586/kernel/drivers/crypto/padlock-sha.ko): No such device
See similar errors reported on ubuntu forums... with various recommended workarounds... update/add an alias, blacklist a module, fresh install
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Jun 24, 2011
I have been a regular user of Linux and have never faced a problem like this one, after I installed Linux Fedora 14 on my laptop. After installation, almost all the softwares that I was earlier using with the earlier version of Fedora are stopping immediately on starting and exitting with a fatal error. eg. when I try to run paraview, it immediately closes after giving some fatal error. Similar is the case with gambit, tecplot and mayaVi softwares.With my earlier version of Fedora, I was not facing any problem. But since I installed Fedora 14, I am facing this problem. I even tried by downloading and installing latest version of paraview and mayaVi from the net, but the latest versions also on starting give the same error : fatal error, and exit the program.
The softwares I mentioned immediately close indicationg a fatal error. The following error messages appear in the console after abrupt shut down of softwares with fatal error :
Output of /var/log/message file:
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Nov 28, 2009
For the last week or so, I've been getting the following warning whenever I do an update. Is it expected, or should it be bugged?
Code:
Finished Transaction Test
Transaction Test Succeeded
Running Transaction
Warning: RPMDB has been altered since the last yum transaction.
Updating : pulseaudio-libs-0.9.21-1.fc12.x86_64 1/53
dd_wizard
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Aug 11, 2010
Fedora 13 (2.6.33.6-147.2.4.fc13.i686)
Every time I use YUM from the CLI the following message shows up: Code: Warning: RPMDB altered outside of yum. ** Found 1 pre-existing rpmdb problem(s), 'yum check' output follows: wine-common-1.2.0-1.fc13.noarch has missing requires of wine-core = ('0', '1.2.0', '1.fc13') What is this? How to deal with it?
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Aug 28, 2009
I've just installed for the first time Centos 5.3 on my machine. everything goes in harmony except : 1-when I power off, everything seem to be terminated smoothly but at last I get this annoying error "kernel panic not syncing : fatal exception" 2-my Ethernet card won't get operational; its detected already but when I try to activate it I get this error " eth0 seems not to be present. Initialization delayed"
System Information:
System Manufacturer: Gigabyte Technology Co., Ltd.
System Model: 965P-DS3
BIOS: Award Modular BIOS v6.00PG
Processor: Intel(R) Core(TM)2 CPU 6600 @ 2.40GHz (2 CPUs), ~2.4GHz
[code]...
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Jul 9, 2010
I installed fedora 10 on my laptop. But I am getting this error when it is booting up:
Code:
Release Date : 5 November 2008
X Protocol Version 11 , Revision 0
[code]....
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Jun 14, 2010
Trying to Interface USB Wifi Dongle with Linux (Fedoracore 8 While giving modprobe zd1211rw following FATAL Error throws;
[root@localhost linux-2.6.22.18]# /sbin/modprobe zd1211rw //////////////modprobe command
WARNING: Error inserting ieee80211_crypt (/lib/modules/2.6.23.1-42.fc8/
kernel/net/ieee80211/ieee80211_crypt.ko): Invalid module format
WARNING: Error inserting ieee80211 (/lib/modules/2.6.23.1-42.fc8/
kernel/net/ieee80211/ieee80211.ko): Invalid module format
[Code]...
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Jun 14, 2010
Trying to Interface USB Wifi Dongle with Linux (Fedoracore 8)
While giving modprobe zd1211rw following FATAL Error throws;
How to overcome this FATAL Error? What prerequisites need to check?
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Jun 25, 2010
how to resolve kernel panic error at my remote RHEL5 server side. i know normal solution through cd &n/w boot and enter in rescue mode and using mkinitrd but with out this how to solve.
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Sep 9, 2010
I have a system here that tends to have kernel panics during an linux installation, though I was able to perform a vista installation on the same hardware. Now I would like to ask what your suggestion for the cause of that problem is. Here a screenshot: [URL]
I suspect the hd to cause it:
-it is now over 7 years old
-smartctl displays over 16k read error and 0.5mio seek errors
(or are such high numbers normalfor that old disks?)
-the panic contains the string bad_area in the trace
But it might also be a RAM error, since the trace contains sth about page_fault and vista installs on the very same hdd and does not report any error messages (concerning the hardware, and I heard win doesn't complain about a bad RAM).
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Feb 14, 2011
I untared a few libs on the wrong server (that's the when you're supposed to start laughing!) and I corrupted my server. Everytime it boots up, I get the following error:
/sbin/init: relocation error: /lib/tls/libc.so.6: symbol _dl_out_of_memory, version GLIBC_PRIVATE not defined in file ld-linux.so.2 with link time reference. Kernel panic - not syncing. Attempted to kill init!
I can I restore the original libs? I'm running RHEL 2.6.9-42 on a Proliant DL585.
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May 25, 2011
i tries to upgrade my fc14 to fc15 using preupgrade. during installation packages process i get an error "fatal error bla-bla-bla installing netsniff-ng-...". i've booted in fc14 (in emergency mode) and manually removed old netsniff-ng package and installed new package. after that i've booted in preupgrade process. it finishes successfull. but now i can't boot in fc15 - i get "kernel panic" error. i've opened grub.conf and there is no 'initrd' section and there is no initramfs for fc15 in /boot folder. i've tried to boot fc15 with initrd /initramfs-bla-bla-fc14.i686.PAE.img. fc15 booted, but i think something wrong, because network not working, and there is only "lo" in ifconfig. what can i do?
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Dec 8, 2010
I had an earlier thread with wrong title and wasn't sure of the problem at the time. Now I have some details after checking all the threads about catalyst so posting a new thread. The problem: In korganizer (or To-Do list in kontact), whenever double-clicking or right-click->Edit.. a To-Do item in the summary list window, it crashes Xorg.
[Code]...
Fatal server error: Caught signal 11 (Segmentation fault). Server aborting I think it has something to do with the amd/ati catalyst driver and korganizer. My video card is XFX Radeon HD5670. I have Fedora 14 x86_64 latest update with xorg 1.9.1-3. I tried catalyst 10.9, 10.10, 10.11, and kernel 2.6.35.6-45.fc14.x86_64, 2.6.35.6-48.fc14.x86_64, 2.6.35.9-64.fc14.x86_64. Same problem.
If I use vesa driver, or from another PC with proprietary nvidia driver, no problem. Open source radeon driver works ok but sometimes the display turns off and I can't get back the display. And I need 3D. I scoured through the forum and followed the instructions exactly:
[code]...
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Mar 11, 2010
I have some problems with CentOS 5.4 and standard kernel 2.6.32.7, which I need for realtime extensions.With the solution in this thread: [URL] I could boot the new standard kernel , There are still two error messages during the boot process:
"insmod: error inserting /lib/dm-region-hash.ko -1 fikle exists"
and a problem with ip-tables "could not restore ip-tables line 20" or so
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Jan 31, 2010
I am having a problem with lockups on a new FC12 box (dual core 3 ghz, 4 gb memory,HDPVR,nvidia 8400gs). This happens reliably when replaying MythTV videos, but also randomly at other times using other apps (I suspect also boot but I can't be sure; it just occasionally stalls part way through the boot display).
Usually but not always this is accompanied by a kernel panic (caps lock + scroll lock lights flash on keyboard).
I did a core dump with kdump and it reports:
Thread 1 (<main task>):
Cannot access memory at address 0xffff880028025b70
I am in the process of running memtest86+ right now, and it's been through several passes without errors. I know it needs to run more, but given the reliability of this problem with MythTV video playback I am wondering if the problem could be in the video card memory.
Does anyone know of a linux (or bootable) tester for video memory? All I am able to find are some things for windoze like this.
Also is there any way to track that address from the core dump back to a physical location?
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Jan 7, 2010
I just installed Fedora 12. When I boot, only the following three lines are printed: pnp 00:09: can't evaluate _CRS: 12298 ACPI: Expecting a [Reference] package element, found type 0 Kernel Panic - not syncing: VFS: Unable to mount root fs on unknown-block(0,0) I first installed Fedora using a RAID 1 setup that mirrored each partition, so I thought the problem was coming from GRUB and confusion from what to boot off of. However, I reinstalled Fedora using a simple single drive setup (left the second drive without any partition), and the same error was returned. Is this an ACPI issue with this particular motherboard/BIOS? Any ideas for how I can fix this?
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